yhdU [2018-11-16 16:25:59]

similar to flouride channel

Locus: BSU09600

Isoelectric point: 9.85

Molecular weight: 12.31 kDa

Protein length: 118 aa

Gene length: 354 bp

Function: export of flouride

Product: putative flouride channel

Essential: no

Synonyms: crcBA

Genomic Context

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Categories containing this gene/protein

• Cellular processes → Transporters → Transporters/ other → Other exporters
• Lifestyles → Coping with stress → Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
• Groups of genes → Membrane proteins

Gene

Coordinates: 1,036,953 → 1,037,309

The protein

Protein family

• crcB family (according to Swiss-Prot)

Paralogous protein(s)

• YhdV

Structure

• 5A40 (from Bordetella pertussis, 41% identity, aa 7 ... 87) PubMed

Localization

• cell membrane (according to Swiss-Prot)

Expression and Regulation

Operons

• Genes: yhdW-yhdV-fluC
  Description: PubMed

Biological materials

Mutant

• MGNA-B486 (yhdU::erm), available at the NBRP B. subtilis, Japan
• BKE09600 (ΔfluC::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CCCTATGAAAATACCCGCTA, downstream forward: _UP4_ATCACAATATAAAAAAACCT
• BKK09600 (ΔfluC::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CCCTATGAAAATACCCGCTA, downstream forward: _UP4_ATCACAATATAAAAAAACCT

References

Reviews

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Research papers

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